Review Article |
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Corresponding author: François S. Becker ( phrogbecker@gmail.com ) Academic editor: Uwe Fritz
© 2025 François S. Becker, Graham J. Alexander, Krystal A. Tolley.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Becker FS, Alexander GJ, Tolley KA (2025) Singing on key: An integrative taxonomic revision of barking geckos (Gekkonidae: Ptenopus) with six additional species and keys for morphology and advertisement calls. Vertebrate Zoology 75: 277-323. https://doi.org/10.3897/vz.75.e153514
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Abstract
Barking geckos, Ptenopus Gray, 1866 are burrowing geckos that occur across the xeric regions of southern Africa. They possess unique vocal abilities, with males producing loud advertisement calls to attract females. The taxonomy of the genus has remained stable for six decades, with three recognised species: Ptenopus garrulus (Smith, 1849), P. kochi Haacke, 1964, and P. carpi Brain, 1962. Within P. garrulus, two subspecies have been recognised since 1935: the nominotypical form (P. g. garrulus) and P. g. maculatus Gray, 1866. A recent phylogenetic analysis of the genus found that it contains eight to ten putative species. We used an integrated taxonomic approach to delimit a total of nine species, including evidence from phylogenetics, ecology, calls, and morphology. Ptenopus g. maculatus is elevated to full species, thereby restricting the geographic range of P. garrulus sensu stricto to the greater Kalahari. Additionally, four new species are named which were previously included in ‘P. g. maculatus’: Ptenopus adamanteus sp. nov. from the southern Namib Desert, P. circumsyrticus sp. nov. from the central Namib Desert, P. kenkenses sp. nov. from the northern Nama Karoo, and P. australis sp. nov. from southern Nama Karoo. As a result, the range of P. maculatus sensu stricto is restricted to the central northern Namib Desert. Furthermore, one new species previously included in P. carpi is named P. sceletus sp. nov. from the Skeleton Coast (northern coastal Namib Desert), thereby restricting the range of P. carpi sensu stricto to a small strip of coastal Namib Desert between the Swakop and Kuiseb rivers. The Namib Desert is the centre of diversity for the genus Ptenopus, containing seven of the nine species including the oldest divergent lineages. Two species-level keys are provided: a morphological key and a unique bioacoustic key to the advertisement calls.
Bioacoustics, mate selection, phylogeography, substrate specificity, systematics
The barking geckos, genus Ptenopus, are endemic to the xeric parts of southern Africa (
There are currently three described species of Ptenopus: Ptenopus carpi Brain, 1962, P. kochi Haacke, 1964, and P. garrulus (Smith, 1849), the latter containing two subspecies: Ptenopus garrulus garrulus and P. g. maculatus Gray, 1866. The species P. garrulus was initially described under the genus Stenodactylus, while ‘P. maculatus’ is the type species of the genus Ptenopus erected by
In a recent study,
Advertisement calls, like other courtship signals, tend to be under stabilising selection within a population, but diverge among genetically divergent populations or species (
Cryptic species are common across all branches of life (
Here, we considered four operational criteria or lines of evidence to delimit species in the genus Ptenopus under the unified or general lineage species concept (GLC:
Geckos were located using a T16 LED Lenser torch to spot eye-shine at night (this method may be aided with binoculars), and/or by their vocalisations at dusk. Male advertisement calls of each Ptenopus species were recorded with digital recorders including Olympus WS–802, Bell DVR–6006, and N28 Professional HD Intelligent, at a resolution of 16 bit and sampling rate of 48 kHz, at a distance of ~60 cm from the calling males. The recorders were placed at the burrow entrance of a calling male with a small crescent of soil around as a wind shelter. DS1922L/T/E/S temperature logger iButtons were placed behind the burrow entrance to record the environmental temperature at which geckos are willing to call, with their head out of the burrow. Geckos were subsequently captured from the burrows or while foraging, and photographed using a Nikon D3100 camera with 18-55 zoom lens and 22 mm Meike digital zoom extension tubes. Photographs included various angles (usually dorsal, ventral, and lateral) of the entire gecko, the head, the hands and feet, the vent, and around the body, marking the gecko on the white belly with a marker pen (to keep count of scales), with a ruler for scale, for morphometric analyses (for geckos that were released). The snout-vent length (SVL) and total length (TL) were also measured before release. Some geckos were collected as voucher specimens: These were photographed also to capture colour variation. Geckos were euthanised by injecting MS-222, after which a liver sample was extracted from a small mid-ventral incision; specimens were then fixed in 10% formalin, rinsed, and stored in 75% ethanol. All new specimens collected as vouchers, were deposited at the National Museum of Namibia (NMNW).
Species in the genus Ptenopus were delimited based the general lineage or unified species concept (GLC:
Evidence for the phylogenetic and ecological operational criteria were based on the results from
Putative species from
| Putative taxa | Species name assigned |
| Ptenopus garrulus garrulus (North + South) | Ptenopus garrulus sensu stricto |
| Ptenopus garrulus maculatus Southeast | Ptenopus australis sp. nov. |
| Ptenopus garrulus maculatus South | Ptenopus adamanteus sp. nov. |
| Ptenopus garrulus maculatus Central | Ptenopus circumsyrticus sp. nov. |
| Ptenopus garrulus maculatus East | Ptenopus kenkenses sp. nov. |
| Ptenopus garrulus maculatus North | Ptenopus maculatus sensu stricto* |
| Ptenopus kochi | Ptenopus kochi |
| Ptenopus carpi sensu stricto | Ptenopus carpi sensu stricto |
| Ptenopus carpi North | Ptenopus sceletus sp. nov. |
| *raised from a subspecies | |
Under the phylogenetic criterion, several steps or subcriteria were employed to thoroughly test, carried over from
For the ecological criterion, clear, consistent, and relatively discontinuous differences between putative species in their substrate preference (
For the mate recognition criterion, significant differences in any bioacoustic characters of the advertisement calls, or fixed differences in visual characteristics with signalling potential (sexual dichromatism and eye colour) were interpreted as evidence for evolutionary independence.
For the morphological criterion, phenetic clusters (quantitative, significant differences among morphological characters) or diagnosable, fixed differences (qualitative) were interpreted as evidence for evolutionary independence. Because the morphological differences between the recognised species are already defined (
A conservative stance was used in delineation of species with this integrative taxonomic framework (
The original species descriptions, type specimens, and type localities were consulted to draw accurate nomenclatural conclusions. Chresonymies for previously recognised species can be found in
This section is a summary of the phylogenetic methods used for easy reference. For a more detailed methods section, refer to
The phylogeny included samples from 79 Ptenopus individuals (see Table S1) and one Narudasia festiva (outgroup) sample. Two mitochondrial markers (ND2 and 16S) were used for all phylogenetic analyses, while one nuclear marker (c-mos) was sequenced for selected individuals only, to resolve the relationships of deeper phylogenetic divergences. Bayesian inference (BI) analyses were run in MrBayes 3.2.7 (Huelsenbeck and Ronquist 2001) and maximum likelihood (ML) analyses in RAxML-VI-HPC v7.0.4 (Stamatakis 2006), on the combined dataset of 2016 characters, partitioned into the three genes.
Two models were used for species delimitation: Automatic barcode gap detection (ABGD; Puillandre et al. 2012) and Bayesian general mixed Yule-coalescent model (bGMYC) v. 1.0 (Carstens and Reid 2012), using the mitochondrial markers.
Multiple regression on distance matrices models (MRMs) in R (v. 4.1.0, R Core Team 2021) were used to test for a positive relationship between mitochondrial sequence divergence (p distance) and various explanatory variables (as distance matrices – refer to
Sequence divergence between the species was estimated in MEGA X (Kumar et al. 2016) using uncorrected net mean p distances for each of the genes separately.
Co-occurrence pattern as either allopatric, parapatric, or sympatric was deduced from field observations and occurrence data (see Distribution mapping, below). The co-occurrence states of all species pairs were compiled into a matrix.
A total of 890 calls from 105 individuals, sampled from the nine putative species and from various localities or populations, were analysed (Table S1). Only calls from genotyped populations were included in this study. No more than 10 calls per individual were included, usually the first ten. Call characters were averaged per individual for all analyses.
Individual calls were cut as separate WAV files and analysed with a customised code (File S1) using the program R (
The call characters measured and terminology used were based on recommendations developed by
Thirteen bioacoustic characters were measured, including newly proposed characters which are ratio-based: 1. Number of notes; 2. note repetition rate (s-1); 3. median note duration (ms); 4. note 1 duration deviance (difference between the first note duration and the median note duration, in percentage of the median); 5. median inter-note interval (ms); 6. inter-note interval range (as a percentage of the median inter-note interval: a measure of variability); 7. median call density (median note duration divided by median inter-note interval, no units, with “denser” calls having longer notes and shorter intervals); 8. call duration (s); 9. dominant frequency or upper frequency peak (kHz)–most Ptenopus species have two frequency peaks of similar amplitude, but the upper peak is usually the dominant frequency; 10. lower peak frequency, where relevant (kHz)–this may be the dominant frequency at further recording distances; 11. basal frequency (Hz); 12. bandwidth, or upper and lower 90% (of peak amplitude) bandwidth frequencies (kHz); 13. call period (call duration plus following inter-call interval). Characters 11–13 could not be measured for many individuals, and were only used descriptively.
Characters 1–10 were further analysed to test for significant differences among species. Analysis of variance (ANOVA) tests were used for meristic or continuous characters, while non-parametric Kruskal-Wallis tests were used for the ratios. Where the ANOVA indicated significant difference, a post hoc pairwise Tukey’s Honest Significant Difference test was used; for Kruskal-Wallis tests, pairwise Wilcoxon rank sum tests were used for post hoc comparisons. All these characters were represented by box and whisker plots, compiled in R.
Photographs of newly collected material (from genotyped populations – 258 individuals total) and physical specimens (total 48) of various putative species were examined to identify useful diagnosable morphological characters (Table S1). Some meristic characters were measured and statistically analysed, while other qualitative, observed traits are also described in the diagnoses. Snout-vent length (SVL) and tail length (TL) was measured with callipers for most specimens from all species; TL was only measured for specimens with full original tails. The TL as a percentage of SVL was calculated and qualitatively compared among species.
Thorough analyses of meristic and morphometric characters in the genus Ptenopus supported only three clearly distinct species (
Within the P. garrulus group, the number and shape of the scales on the snout, and the number of body or head scales were identified as potentially useful morphometric/meristic characters; see
Significant differences among P. garrulus group putative species were tested for in seven morphological characters, including ratios (e.g., as quantification of shape and size of scales on the snout): 1. IN/INSBB, 2. RB/RH, 3. INSH/NB, 4. MBSR, 5. IOS, 6. IOS/MBSR, and 7. INS. Analysis of variance (ANOVA) tests were used for meristic characters, while non-parametric Kruskal-Wallis tests were used for the ratios. Where the ANOVA indicated significant difference, a post hoc, pairwise Tukey’s Honest Significant Difference test was used; for Kruskal-Wallis tests, pairwise Wilcoxon rank sum tests were used for post hoc comparisons. All these variables were represented by box and whisker plots, compiled in R.
For the two P. carpi group putative species, iris colouration and sexual dichromatism of gular patches were inspected in 105 photographed individuals from various genotyped populations (Table S1). Iris colouration was qualitatively compared using photographs taken by the same camera, flash, and lenses (see Field Sampling, above), and the same colour balance settings. Colours were descriptively assigned. The presence or absence of a clear yellow gular patch was recorded for males and females (typically, all males have a yellow gular patch). In the potential contact zone close to the Swakop River, photographs from iNaturalist (https://www.inaturalist.org) records close to the Swakop River were also included for additional data on iris colouration and gular patches.
The following additional measurements in mm were reported, only for the type series of all newly described species: Head length (HL), measured ventrally from the tip of the snout to the anterior narrowest portion of the throat, usually between two subtle neck folds (jawline is usually obscured); head width (HW), at the widest point; head height (HH), at the jaw angle behind the eye; horizontal eye diameter (EYE); distance between the anterior corners of the eyes or eye-distance (EED); number of upper labials (UL); number of lower labials (LL); number of post-mental chin scales (PM).
Updated occurrence maps were produced for Ptenopus species based on published records and maps reviewed in
Species delimitation analyses indicated between six and 25 species (Fig.
Bayesian topology of Ptenopus (top right) based on mitochondrial genes 16S and ND2, and nuclear gene c-mos (top right), and map of confirmed species locations (top left) including type localities (high resolution image: can be zoomed for detail; modified from
The nine species supported by the phylogeny as clades, phylogenetic species delimitation, and MRMs, which were further tested by other species delimitation cirteria (below), are indicated by different colours on the phylogeny (Fig.
Genetic divergences between most of these species pairs (Tables
Inter- and intraspecific pairwise uncorrected net sequence divergences (p distance, %) for the nine species of Ptenopus, based on the ND2 mitochondrial gene; intraspecific distances on the diagonal. Outlier values (≤6% interspecific or >6 % intraspecific p distance) are shown in boldface; more detailed p distances provided for closely related species pairs (*/+).
| Species | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | |
| 1 | P. carpi | 1.3 | ||||||||
| 2 | P. sceletus sp. nov. | 4.6* | 1.6 | |||||||
| 3 | P. australis sp. nov. | 22.6 | 22.4 | 1.3 | ||||||
| 4 | P. circumsyrticus sp. nov. | 20.7 | 20.0 | 12.9 | 6.0 | |||||
| 5 | P. kenkenses sp. nov. | 19.7 | 19.6 | 11.8 | 9.1 | 6.4 | ||||
| 6 | P. garrulus | 21.0 | 20.4 | 5.7+ | 10.9 | 9.5 | 4.8 | |||
| 7 | P. adamanteus sp. nov. | 19.1 | 18.7 | 10.1 | 8.5 | 8.0 | 9.0 | 8.8 | ||
| 8 | P. maculatus | 18.2 | 17.6 | 18.0 | 14.9 | 14.2 | 16.5 | 13.9 | 6.0 | |
| 9 | P. kochi | 22.6 | 22.3 | 21.7 | 19.5 | 18.8 | 21.2 | 17.6 | 13.7 | 0.5 |
| * At the contact zone of P. carpi sensu stricto and P. sceletus sp. nov. (samples 0 – 36 km apart), interspecific p distance range is 5.7–7.4% (simple mean 6.3%), compared to 0.0% (n = 3) mean intraspecific p distance for P. sceletus sp. nov and 2.3% (n = 3) intraspecific p distance for P. carpi sensu stricto here. | ||||||||||
| + Interspecific p distance range is 7.5–11.3% (simple mean 8.7%) including samples <300 km apart, compared to only 1.3% mean intraspecific p distance for P. australis sp. nov. including samples up to 320 km apart, and only 4.8% mean intraspecific p distance for P. garrulus sensu stricto including samples up to 1400 km apart. | ||||||||||
Inter- and intraspecific pairwise uncorrected net sequence divergences (p distance, %) for the nine species of Ptenopus, based on the 16S mitochondrial gene; intraspecific distances on the diagonal. Outlier values (≤3.5% interspecific or >3.5% intraspecific p distance) are shown in boldface; more detailed p distances provided for closely related species pairs (*/+).
| Species | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | |
| 1 | P. carpi | 0.3 | ||||||||
| 2 | P. sceletus sp. nov. | 0.1* | 0.6 | |||||||
| 3 | P. australis sp. nov. | 11.2 | 10.9 | 0.8 | ||||||
| 4 | P. circumsyrticus sp. nov. | 10.0 | 9.6 | 7.2 | 2.8 | |||||
| 5 | P. kenkenses sp. nov. | 9.5 | 9.1 | 6.2 | 5.9 | 2.9 | ||||
| 6 | P. garrulus | 10.3 | 9.8 | 1.4+ | 6.4 | 5.2 | 2.2 | |||
| 7 | P. adamanteus sp. nov. | 8.4 | 7.9 | 6.3 | 4.8 | 3.5 | 4.9 | 4.3 | ||
| 8 | P. maculatus | 10.2 | 9.9 | 10.7 | 8.8 | 7.4 | 9.6 | 7.2 | 3.5 | |
| 9 | P. kochi | 13.3 | 13.1 | 12.6 | 10.4 | 9.1 | 11.7 | 9.0 | 4.3 | 0.6 |
| * At contact zone (samples 0–36 km apart), interspecific p distance range is 0.4–0.5% (simple mean 0.4%), compared to only 0.1% mean intraspecific p distance for P. sceletus sp. nov. and 0.3% for P. carpi sensu stricto here. | ||||||||||
| + Interspecific p distance is 1.5–9.8% (simple mean 2.9%) including samples <300 km apart, compared to mean intraspecific p distance of only 0.8% for P. australis sp. nov. including samples up to 320 km apart, and 2.2% for P. garrulus sensu stricto including samples up to 1400 km apart. | ||||||||||
Inter- and intraspecific pairwise uncorrected net sequence divergences (p distance, %) for the nine species of Ptenopus, based on the c-mos nuclear gene; intraspecific distances on the diagonal. Outlier values (0% interspecific, >0% intraspecific p distance, or unable to calculate = NA) are shown in boldface.
| Species | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | |
| 1 | P. carpi | 0.00 | ||||||||
| 2 | P. sceletus sp. nov. | 0.00 | 0.00 | |||||||
| 3 | P. australis sp. nov. | 0.67 | 0.70 | 0.18 | ||||||
| 4 | P. circumsyrticus sp. nov. | 0.68 | 0.78 | 0.16 | 0.09 | |||||
| 5 | P. kenkenses sp. nov. | 0.95 | 1.04 | 0.54 | 0.17 | 0.00 | ||||
| 6 | P. garrulus | 0.93 | 1.02 | NA* | 0.17 | 0.51 | 0.00 | |||
| 7 | P. adamanteus sp. nov. | 0.70 | 0.79 | 0.27 | NA | 0.26 | 0.26 | 0.00 | ||
| 8 | P. maculatus | 0.94 | 1.02 | 0.55 | 0.27 | 0.53 | 0.52 | 0.27 | 0.00 | |
| 9 | P. kochi | 1.20 | 1.29 | 0.62 | 0.52 | 0.78 | 0.77 | 0.53 | 0.26 | 0.00 |
| * There is a one-to-two bp differrence between P. australis sp. nov. and all P. garrulus sensu stricto samples, except for three individuals of P. garrulus which also have this (ancestral?) haplotype. | ||||||||||
Evolutionary independence of all sister species pairs and some of the more distantly related species was further validated by sympatric and/or parapatric occurrence of these lineages, except in the case of P. australis sp. nov. which does not occur in close contact with P. garrulus sensu stricto or other species (Table
Interspecific co-occurrence pattern for the nine species of Ptenopus as either allopatric (A), parapatric (P) or sympatric (S). Lower-case letters indicate co-occurrence to a limited geographic extent, i.e. not the primary zone of contact between the relevant species. Question marks indicate inferred, but uncertain co-occurrence based on expected distributions.
| Species | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | |
| 1 | P. carpi | ||||||||
| 2 | P. sceletus sp. nov. | P/s | |||||||
| 3 | P. australis sp. nov. | A | A | ||||||
| 4 | P. circumsyrticus sp. nov. | P | A | A | |||||
| 5 | P. kenkenses sp. nov. | A | A | A | A/p | ||||
| 6 | P. garrulus | A | A | A | A | P | |||
| 7 | P. adamanteus sp. nov. | A | A | A | A/p? | P | A | ||
| 8 | P. maculatus | S | P/s | A | P/s | A | A | A | |
| 9 | P. kochi | P | A | A | P | P | A | P | P/s |
The closely related species P. carpi sensu stricto and P. sceletus sp. nov. occur parapatrically across the Swakop River near the coast, with a small zone of sympatric occurrence in the Rössmund area (~8 km inland), within 3 km south of the river. This river is not an impermeable barrier to dispersal: It is ephemeral and Ptenopus even occurs in the riverbed in some places. Despite this, P. carpi sensu stricto was exclusively recorded on the southern side of the river or contact zone, while P. sceletus sp. nov. generally occurs north of the river, in the river, and immediately to the south. In the small sympatric zone south of the river, 57% of photographed animals conformed to P. sceletus sp. nov. and 43% to P. carpi sensu stricto phenotypes according to gular and iris colouration (Table S1; see Recognition / morphology: Eye colour and sexual dichromatism below). These species clearly remain genetically separated in and around the contact zone. Of the 52 animals observed, sampled, and photographed within 6 km on either side of the Swakop River, only one individual was phenotypically intermediate between these species. This female (NMNW R11775) was within the mitochondrial haplogroup of P. sceletus sp. nov. with typical P. sceletus sp. nov. iris colouration, but it had a yellow gular patch like P. carpi sensu stricto. This individual may therefore be a hybrid. However, this seems to be a rarity.
Nearly all the Ptenopus species presented here are ecologically divergent from their closest relatives and/or geographically closest neighbours (Fig.
Ptenopus maculatus sensu stricto and its sister species P. kochi clearly occur on different substrates, parapatrically (Fig.
By exception, the closely related P. carpi and P. sceletus sp. nov. occur in very similar habitats and on identical substrates. They occur parapatrically across the Swakop River and sympatrically immediately to the south of the river (Fig.
ANOVA and Kruskal-Wallis test results revealed significant differences (p≤0.001) among species for all 10 bioacoustic characters analysed. Post hoc comparisons showed significant differences in some characters between all comparative species pairs, except between P. garrulus sensu stricto and its sister species, P. australis sp. nov. (Fig.
Box and whisker plots of the bioacoustic characters analysed using ANOVA / Kruskal-Wallis tests, for species of Ptenopus. Numbered characters (numbered as in Methods) and their units are indicated on y-axis labels. Species colours correspond to those on Figure
The variation of sexual dichromatism from across the range of P. carpi (Table S1; Fig. S1) revealed that all females in the range of P. carpi sensu stricto had gular patches (n = 23 photographed, additional individuals observed), while no females with gular patches were found in the range of P. sceletus sp. nov., north of the Swakop River (n = 23 photographed, additional individuals observed). However, one individual (NMNW R11775) from 2 km south of the river was genotyped and found to match the mitochondrial haplogroup for the species P. sceletus sp. nov. (these two species are identical in terms of nuclear c-mos) but had a yellow gular patch, as in P. carpi sensu stricto.
For iris colouration (Table S1; Fig. S2), all P. carpi sensu stricto individuals had red (light red to dark red) irises (n = 43 photographed, additional individuals observed), while all P. sceletus sp. nov. individuals had silver to brown irises (n = 51 photographed, additional individuals observed). Of these, six iNaturalist records from just south of the Swakop River (phylogenetics shows both clades occur here) with silver or brown eyes were tentatively assigned to P. sceletus sp. nov. Individual NMNW R11775 (mitochondrial species P. sceletus sp. nov., but occurring south of the river) had red-brown eyes. Only one individual of P. sceletus sp. nov. had ochre (similar to “light red”) eyes, although this individual was found 400 km north of the Swakop River, far from the contact zone between the species.
ANOVA and Kruskal-Wallis tests reveal significant differences (p≤0.001) among species for all seven morphological characters (including morphometric ratios and meristic characters) analysed. Post hoc comparisons showed significant differences in one or more characters between all species pairs, except between P. garrulus sensu stricto and P. kenkenses sp. nov. (Fig.
Box and whisker plots of the morphological characters analysed using ANOVAs or Kruskal-Wallis tests, for cryptic species of the Ptenopus garrulus group. Numbered characters (numbered as in Methods) are indicated on y-axis labels: 1. Internarial / internasal scale base breadth; 2. rostral breadth / height; 3. internasal scale height / nostril breadth; 4. mid-body scale rows; 5. interorbital scales; 6. interorbital / mind-mody scales; 7. inter-nasal scales. Species colours correspond to those on Figure
All the specimens of P. kenkenses sp. nov. have some dark pigmented scales on the fore-and-hindfoot soles, while all P. garrulus sensu stricto specimens had some pinkish, unpigmented scales on the soles. This appears to be a fixed difference between these species, but may be difficult to see on old, preserved specimens. Furthermore, toe fringes tended to be clearly more extensive on P. garrulus sensu stricto than other P. garrulus group species including P. kenkenses sp. nov., except for some P. circumsyrticus sp. nov. individuals.
All nine species described below were supported by at least three lines of evidence (Table
Lines of evidence or operative criteria under the GLC, which support each species of Ptenopus (as ‘yes’ or ‘no’). The total number of criteria supporting each species as a separately evolving metapopulation lineage is indicated (see Methods). ‘Recognition’ = ‘Mate Recognition’.
| Putative Species | Phylogenetic | Ecological | Recognition | Morphological | Total |
| P. garrulus sensu stricto | yes | yes | no | yes | 3 |
| P. australis sp. nov | yes | yes | no | yes | 3 |
| P. adamanteus sp. nov. | yes | yes | yes | yes | 4 |
| P. circumsyrticus sp. nov. | yes | yes | yes | yes | 4 |
| P. kenkenses sp. nov. | yes | yes | yes | yes | 4 |
| P. maculatus sensu stricto | yes | yes | yes | yes | 4 |
| P. kochi | yes | yes | yes | yes | 4 |
| P. carpi sensu stricto | yes | no | yes | yes | 3 |
| P. sceletus sp. nov. | yes | no | yes | yes | 3 |
Cheat-sheet to the key bioacoustic characters per species for quick identification. Only mean values are displayed. Boldface values and descriptive remarks are the key features distinguishing a particular species from most other species and/or the most similar species’ calls. Refer to Figure
| Species | 1. number of notes | 2. note repetition rate (s-1) | 3. median note duration (ms) | 4. note 1 duration deviance (%) | 5. median inter-note interval (ms) | 6. inter-note interval range (%) | 7. median call density | 8. call duration (s) | 9. upper dominant frequency (kHz) | 10. lower peak frequency (kHz) | Descriptive remark |
| P. garrulus | 5 | 5.2 | 21 | 15 | 168 | 25 | 0.13 | 0.9 | 4.1 | 2.1 | Fast, quite regular |
| P. australis sp. nov. | 6 | 7.0 | 21 | 6 | 117 | 29 | 0.18 | 0.8 | 4.4 | 1.5 | Very fast, high-pitched |
| P. adamanteus sp. nov. | 5 | 2.6 | 34 | 14 | 341 | 56 | 0.10 | 1.8 | 4.1 | 1.8 | Slow, last note delayed |
| P. circumsyrticus sp. nov. | 4 | 2.4 | 50 | 18 | 360 | 12 | 0.13 | 1.4 | 3.9 | 2.8 | Slow, regular |
| P. kenkenses sp. nov. | 5 | 2.5 | 84 | 31 | 309 | 23 | 0.27 | 1.6 | 3.5 | 2.0 | Long notes, short intervals |
| P. maculatus | 6 | 4.9 | 54 | 139 | 140 | 19 | 0.40 | 1.1 | 3.4 | 2.0 | First note much longer |
| P. kochi | 13 | 7.8 | 25 | 23 | 99 | 28 | 0.28 | 1.5 | 3.3 | 1.4 | Fast, many notes |
| P. carpi | 9 | 2.1 | 27 | 8 | 675 | 85 | 0.06 | 3.6 | 3.4 | 1.2 | Starts slow, then faster |
| P. sceletus sp. nov. | 9 | 2.8 | 25 | 8 | 329 | 116 | 0.08 | 3.7 | 4.4 | 1.5 | Starts faster, then slows or consistent |
Chresonymies (including all major taxonomic revisions with the given names) are provided for each species, along with a short taxonomic and nomenclatural discussion.
Updated distributions are provided in species accounts and on Figure
Revised, interpreted distributions of Ptenopus species in southern Africa (high resolution map, can be zoomed for detail). Some species’ ranges overlap, shown with translucent overlapping shapes on the map. Others likely occur parapatrically along extended contact zones, represented by opaque, touching shapes. For further clarity, co-occurrence patterns for all species pairs are shown on Table
Koch’s barking gecko
Afrikaans: Duin blafgeitjie
Ptenopus garrulus maculatus (in part) – FitzSimons (1943: 13)
Ptenopus garrulus
(in part) –
Ptenopus kochi
Haacke, 1964: 1, pls. I–V,
A description of the morphology of this species is not revised here. An updated diagnosis, some natural history observations, and a formalised bioacoustic call description, are provided.
TM 28809, adult male, collected from “Gobabeb, South West Africa [Namibia], central Namib Desert (–23° 37’ South, 15° 03’ East, 408 m)”, by Wulf D. Haacke in October 1963.
TM 24993–4, collected by Charles Koch in October 1957; TM 25880–1, 25887, 25889–90, collected by Charles K. Brain in May 1959; TM 28442–6, 28448–55, 28625–7, collected by Wulf D. Haacke in October 1963. Locality: same as holotype.
See Table S1 for vouchered (1) and unvouchered photographed (16) specimens, DNA samples (16 available, 7 sequenced), and call recordings (20) included (total n = 34).
The largest Ptenopus (SVL max. 65.1, mean 61.1, n = 23) with the longest tail (TL 83% [range 63–96%] of SVL, n = 23), an overall plump appearance, extensive toe fringes and elongated fringed scales on the fingers compared to other species. It is distinguished from all other congeners by a combination of the following characters: Body and head scales finer than other species, with MBSR 187–210 (vs. generally <200 for P. garrulus and <180 for other species); dorsal colour pattern (Fig.
Life colour variation and burrow cast of Ptenopus kochi: A NMNW R11725 from Gobabeb, Erongo Region, Namibia (–23.5779, 15.0423); B FB2120 from NamibRand Nature Reserve, Hardap Region, Namibia (–24.9770, 15.9302); C NMNW R11751 from Far East Dunes, Hardap Region, Namibia (–23.7953, 15.7825); D FBPtK13 from NW of Gobabeb (–23.3591, 14.8171); E aluminium burrow cast (uncatalogued) from Gobabeb (–23.5622, 15.0403); F individual A, showing typical yellow incursions on the body of males. Photos by Francois S. Becker.
In life (Fig.
Ventrally, animals are immaculate white with pinkish patches on the limbs, soles, and tail. Males have brilliant yellow throats, the colour extending across the entire ventral and dorso-ventral surface of the head and often along the lateral surfaces of the body and legs.
In preservative, the dorsal colours eventually fade to beige, brown, and grey. The brighter colours, especially yellow, eventually fade completely.
(Figs
This species calls more intensively and for a shorter period of time than its sympatric or parapatric congeners (P. carpi, P. maculatus and P. circumsyrticus sp. nov.). Calling also commences earlier in the day than these congeners. Call period (mean 74 s) varies greatly, but can be as low as 9 seconds during peak chorus activity. Calling activity is crepuscular, commencing shortly before or at sunset, and ending at nightfall. Sporadic calls may occasionally be heard later at night, in the morning, or on overcast days (
Occurs throughout the Namib erg in the central Namib Desert, Namibia, except possibly in the southwestern extreme of this erg in the winter rainfall zone, near Lüderitz. The northern limit of its distribution is generally aligned with the northern extent of the sand sea.
The habitat of this species was initially described as the silts in Kuiseb River and the interdune plains by (
Ptenopus kochi occurs parapatrically alongside P. circumsyrticus sp. nov. throughout the Namib erg, and in occasional sympatry or occasional syntopy. It also occurs parapatrically with P. carpi and P. maculatus along the Kuiseb River. Some P. kochi do occur on the northern banks of the Kuiseb River, occasionally in sympatry with P. maculatus and P. circumsyrticus sp. nov., on sandier patches of the gravel plains. These animals are genetically divergent from those on the southern side of the river.
Breeding generally occurs from September to December (
It has previously been characterised as being nocturnal (
Courtship appears to be more complex than in other species, and also more variable. Some courtship encounters witnessed by FB were similar to that of P. maculatus, with the female simply approaching the calling male and the male responding with a few calls. The female then scratches rapidly at the burrow entrance to indicate she wants to enter, after which the male retreats backwards and the female follows him inside. In other encounters, the males may exit the burrow and display their gular patch to the approaching female. Yet more variations, including mutual head bobbing and soft vocalisations, have been observed (
Fighting is common among closely-spaced males. In one observation (FB), a young male charged a much larger calling male at its burrow entrance, from several metres away. The two animals stood belly-to-belly on their back legs, rapidly clawing one-another with their hands for one or two seconds, before the younger male retreated. Scars from bite-marks on the body are commonly observed in both sexes, but more often in males.
The burrows of P. kochi tend to be more complex than other species, often with more than one entrance (
Kalahari barking gecko / Garrulous barking gecko
Afrikaans: Kalahari blafgeitjie / Grondgeitjie
Stenodactylus garrulus Smith, 1849: Append. 6
Ptenopus garrulus
(part) –
Ptenopus garrulus garrulus
–
Ptenopus garrulus maculatus
(part) –
Sir Andrew Smith did not specify the type locality of P. garrulus beyond “sandy districts in the interior of southern Africa” (
The morphological characters and colour pattern of the P. garrulus type specimens from the BMNH (1946.8.23.43–49) fall within the range of P. garrulus sensu stricto in this study (except slight deviations in IOS, typically ≤46 for P. garrulus sensu stricto, for two specimens: BMNH 1946.8.23.44 IOS = 48 and 1946.8.23.46 IOS = 47). Specimen BMNH 1946.8.23.47 conforms most unambiguously to these morphological characters (Fig.
BMNH 1946.8.23.47, collected from “sandy districts in the interior of southern Africa” (probably Northern Cape, South Africa), by Andrew Smith between 1834 and 1836.
BMNH 1946.8.23.43–46, 1946.8.48–49, same collection details as the lectotype.
See Table S1 for vouchered (11) and unvouchered photographed (13) specimens, DNA samples (33 available, 20 sequenced), and call recordings (23) included (total n = 44 excluding types).
A small Ptenopus (SVL max. 53.4 mm, mean 46.6 mm, n = 22) with a moderate tail (TL 69% [range 50–86%] of SVL, n = 17) and a generally slender appearance. This species is easily distinguished from P. kochi, P. carpi and P. sceletus sp. nov. by a combination of the following morphological characters: Toes extensively fringed laterally (similar to P. kochi vs. weakly fringed in P. carpi and P. sceletus sp. nov.), with fringe length roughly equal to the breadth of the toe between fringes (vs. fringe length generally less than half toe breadth in P. carpi and P. sceletus sp. nov.); having white pigmented ventral scales with some pink, unpigmented scales on the (hand/foot) soles (vs. pink, unpigmented patches also on the tail and limbs in P. kochi, and white entire in P. carpi and P. sceletus sp. nov.); having MBSR ~182 (range 156–202, n = 31) (vs. 187–210 in P. kochi and usually <135 in P. carpi and P. sceletus sp. nov.). It is further distinct from P. carpi and P. sceletus sp. nov. by the nasals being more swollen and the nostrils partially covered by internal projections of the upper labials, and by more-or less speckled dorsal colour pattern (vs. banded pattern in P. carpi and P. sceletus sp. nov.); from P. kochi by having fingers laterally fringed with pointed triangular scales (vs. elongated pointed scales in P. kochi).
From congeners previously included under ‘P. garrulus’, P. garrulus sensu stricto is distinguished by: (when live) patches of pink, unpigmented scales on soles (vs. white pigmented in other species and white or slightly pinkish with dark brown speckles in P. kenkenses sp. nov. and P. australis sp. nov.); having higher RB/RH (~1.12, range 0.95–1.24, n = 10) than P. australis sp. nov. (≤0.97); having higher MBSR (~182, range 156–202, n = 31) than P. australis sp. nov., P. circumsyrticus sp. nov., and P. maculatus sensu stricto (usually <149); dorsal colour pattern relatively speckled, consisting of >2 longitudinal rows of white spots (rows may join to form irregular bands), including 5–7 clear (but not large) dorsolateral pairs of light spots between pectoral and pelvic girdles, with indistinct dark patches not touching the white, or dark patches absent, and indistinct or no patterning on ventro-lateral sides of the face, vs. 4–5 large and distinctive paired, light, ovoid markings interspaced by distinct dark mottled patches usually touching the light markings, and ovoid patterning on ventro-lateral portions of the face being more distinctive in P. kenkenses sp. nov. (and some populations of P. adamanteus sp. nov. or P. circumsyrticus sp. nov.); toe fringes being generally more extensive (with fringe length roughly equal to the breadth of the toe between fringes) than other species (fringe length usually about half toe breadth), but similar to P. australis sp. nov.
In life (Fig.
Life colour variation and substrate matching in Ptenopus garrulus: A NMNW R11351 from Etosha, Oshikoto Region, Namibia (–18.9979, 15.8657); B NMNW R10846, from farm Bloukop (–25.0953, 19.8497), Hardap Region, Namibia; C FB724 from locality A; D NMNW R11581 from farm Okongonga, Hardap Region, Namibia (–24.4529, 18.7631); E, F NMNW R11577 from south of Windhoek, Khomas Region, Namibia (–22.8691, 17.1561). Photos by Francois S. Becker.
In preservative, the lighter colours fade to off-white or beige, and all the darker colours appear various shades of dark brown or grey. The brighter colours, especially yellow, fade completely.
The advertisement call (Figs
During peak chorus activity, this species calls much more frequently than most other species, the call period being very short: mean 25 s, and as low as 4 s. However, calling activity is short in most localities visited by the author, usually commencing around 20 min after sunset, and lasting only 20–40 mins. Calling may continue later if the moon is above the horizon and conditions are warm, but at an extremely decreased rate. More extensive and intensive choruses, lasting throughout the night, have been recorded shortly after rain (
This is the most widespread member of the genus, occurring on sandy soils across much of arid or semi-arid (generally above 150 mm but less than 550 mm annual rainfall) southern Africa, but not in the Namib Desert or the pro-Namib (Fig.
The main calling period coincides with the breeding season (
Damaraland barking gecko / Spotted barking gecko
Afrikaans: Damaraland blafgeitjie
Ptenopus maculatus Gray, 1866: 640, pl. 38: 1
Ptenopus garrulus
(part) –
Ptenopus garrulus maculatus
(part) –
Ptenopus maculatus was described from “Damaraland”, collected by Karl (= Charles) J. Andersson. This species was synonymised under the name ‘P. garrulus’ (
According to Andersson’s notes and the location names used at the time (see map in
From the P. garrulus group species, “Damaraland” contains only P. maculatus sensu stricto (as presently treated). Additionally, the type specimens (BMNH 1946.8.23.53, 54) and a detailed drawing from the type description match the colour pattern and appearance of P. maculatus sensu stricto. Finally, the morphometric measurements of the BMNH types generally support this classification, and most unambiguously so for BMNH 1946.8.23.54 (Fig.
We elevate the subspecies ‘P. g. maculatus’ to full species, thereby restricting the range of P. maculatus sensu stricto to the central and northern Namib Desert, north of the Kuiseb River (Fig.
BMNH 1946.8.23.54, collected from “South Africa, Damaraland” (Erongo Region – possibly Otjimbingwe, Namibia,), by Karl (=Charles) J. Andersson prior to 1864 (probably in 1851 or between 1855 and 1858, while travelling through and working in this area), as the lectotype for Ptenopus maculatus.
BMNH 1946.8.23.53, same collection details as the lectotype.
See Table S1 for unvouchered photographed (35) specimens, DNA samples (37 available, 12 sequenced), and call recordings (28) included (total n = 69 excluding types).
A moderately large Ptenopus (SVL max. 60 mm, mean 51.7 mm, n = 34) with a moderate tail (TL 69% [range 58–78%] of SVL, n = 21) and stout appearance. It is easily distinguished from P. kochi, P. carpi, and P. sceletus sp. nov. by the following characters: Toes being intermediately fringed laterally (vs. weakly fringed in P. carpi and P. sceletus sp. nov., and extensively fringed in P. kochi), with fringe length being at least half the breadth of the toe between fringes; having MBSR ~135 (range 126–146, n = 35; vs. >180 in P. kochi and usually <135 in P. carpi and P. sceletus sp. nov.); by dorsal colour pattern with four to five large, paired, ovoid markings on a darker background, interspaced by dark brown wavy or broken blotches (vs. more finely spotted in P. kochi and banded in P. carpi and P. sceletus sp. nov.).
From congeners previously included in ‘P. garrulus’ it is distinguished by: Higher IN/INSBB ~7.2 (range 4.9–8.8, n = 8) than P. circumsyrticus sp. nov. (median 4.5, range 3.6–5.8, n = 13); higher RB/RH ~1.17 (range 0.97–1.32, n = 8) than P. australis sp. nov. (<0.97) and P. adamanteus sp. nov. (usually <1.1); higher INSH/NB ~1.53 (range 0.60–2.49, n = 8) than P. australis sp. nov. (usually <0.80) and P. adamanteus sp. nov. (usually <1.00); lower MBSR (~135, range 126–146, n = 35) than P. kenkenses sp. nov. (≥158) and P. garrulus (≥156, usually >170), and somewhat lower than P. adamanteus sp. nov. (median 160, range 141–185, n = 30); lower IOS ~34 (range 29–40, n = 35) than other species (usually >37); lower IOS/MBSR ~0.23 (range 0.21–0.27, n = 8) than P. circumsyrticus sp. nov. (usually >0.27), P. adamanteus sp. nov., and P. australis sp. nov. (usually >0.25); having 1–2 internasal scales in contact with the rostral, vs. three in P. australis sp. nov.; having a different colour pattern than P. garrulus (usually more finely speckled, ovoid markings being much smaller).
In life (Fig.
Life colour variation and substrate matching in Ptenopus maculatus: A Unvouchered individual from Gobabeb, Erongo Region, Namibia (–23.5668, 15.0379); B NMNW R11693 from Spitzkoppe, Erongo Region, Namibia (–21.8393, 15.1946); C NMNW R11668 from the same locality as B; D NMNW R11688 from Hoanib River, Kunene Region, Namibia (–19.3630, 13.1502). Photos by Francois S. Becker.
In preservative, the lighter colours fade to off-white or beige, and all the darker colours appear various shades of dark brown or grey. The yellow fades completely after some days or weeks in ethanol.
The advertisement call of P. maculatus (Figs
Call period (mean 110 s) varies greatly, but can be as low as 10 seconds during peak chorus activity. Calling commences shortly before or at sunset and may continue throughout the night after moonrise and before moonset. Calling activity is more pronounced around the austral spring and/or summer. Rainy weather usually causes calling activity to cease for days to weeks. This species rarely calls during the day.
Ptenopus maculatus occurs on hard substrates, not on soft sand. In the southern and central portions of its range it occurs on granite-weathered gravel. The central Namib gravel plains are almost entirely granite-based gravel (
In the west it occurs syntopically with P. carpi and probably with P. sceletus sp. nov. which prefer the same soils. However, these species occur closer to the coast within the fog zone and the range of overlap is minimal. It occurs parapatrically with P. sceletus sp. nov. in the northern portions of its range, where P. maculatus prefers silts while P. sceletus sp. nov. occurs on gravels. Along the edges of the Namib erg, P. maculatus occurs parapatrically alongside P. circumsyrticus sp. nov. and P. kochi (which occur on sand or sandier patches of gravel plains), or occasionally in sympatry or syntopy with these species where the substrates mix.
Like the other species, P. maculatus males call from their burrow entrance and antagonistic behaviours between males are common if two burrow entrances are within ~2 m. Aggressors will sometimes utter the advertisement call as they look for the transgressing male, possibly to elicit a response. Males will increase calling frequency if a female approaches the burrow. Males may exit the burrow and approach the female, and after a brief encounter will follow the females into the burrow. Alternatively, the male will remain in place until the female scratches at the burrow entrance; the male then reverses into the burrow and the female follows. The male will utter a muffled version of the advertisement call inside the burrow, where copulation likely commences. After about an hour, the female will emerge partially from the burrow entrance, surveying the surrounding area with her head erect for a long time. This behaviour is repeated throughout the first night after a female moves into a new burrow, and its purpose may be to memorise the location of the new burrow entrance. Males presumably move out of the burrow after the female has moved in, as males and females have not been observed living in the same burrow.
Southern barking gecko
Afrikaans: Suiderlike blafgeitjie
Ptenopus garrulus maculatus –
Specimens of this species have not yet been included in any taxonomic revision of this genus, only in two publications on range extensions of ‘P. g. maculatus’. These records were further notably included in the range maps of ‘P. g. maculatus’ by
PEM R23122, adult male, collected from farm Rooidraai, Eastern Cape Province, South Africa (–32.4645, 23.6330, 860 m a.s.l.) by Werner Conradie, Alexander Rebelo, and Philip Jordaan, on 2 November 2017.
PEM R23118–23121, adult males except for PEM R23120 (allotype), collected from farm Doringkraal, Eastern Cape, South Africa (-33.0479, 24.9611, 305 m a.s.l.), by Werner Conradie, Alexander Rebelo, and Philip Jordaan, on 31 October 2017.
See Table S1 for additional unvouchered photographed specimen (1), and call recordings (4) examined (total n = 5 excluding types).
This is the most southern Ptenopus species, occurring near the southernmost tip of Africa. Therefore, we use the specific epithet “>australis”, the Latin (masculine) adjective meaning “southern”.
The smallest Ptenopus (SVL max. 44.6 mm, mean 42.7 mm, n = 5) with the shortest tail of any Ptenopus species (TL 61% of SVL, only one specimen had full original tail, but other paratypes/holotype lost a very small portion of the tail tip and they still appear to be similarly short) and a moderately stout appearance. It is distinguished from P. kochi, P. carpi, and P. sceletus sp. nov. by: Being substantially smaller; toes being intermediately fringed laterally (vs. weakly fringed in P. carpi and P. sceletus sp. nov. and extensively fringed in P. kochi), with fringe length being at least half the breadth of the toe between fringes (vs. generally less than half in P. carpi and P. sceletus sp. nov., and generally equal to in P. kochi); ventral surface being generally white or cream with some unpigmented and/or dark brown-speckled scales on the (hand/foot) soles (vs. substantial pink, unpigmented patches on the tail and limbs in P. kochi, and immaculate white in P. carpi and P. sceletus sp. nov.); having MBSR 140–156, mean 148 (n = 5) (vs. ≥187–222 in P. kochi and usually <135 in P. carpi and P. sceletus sp. nov.); a generally brown-and-cream spotted appearance with some paired light and dark markings dorsally (vs. pinkish or orange, more evenly spotted pattern in P. kochi and banded pattern in P. carpi and P. sceletus sp. nov.). It is further distinct from P. carpi and P. sceletus sp. nov. by the nasals being more swollen and the nostrils partially covered by internal projections of the upper labials; from P. kochi by having fingers laterally fringed with pointed triangular scales (vs. elongated pointed scales in P. kochi).
From congeners previously included in ‘P. garrulus’ it is distinguished by: A smaller internasal scale, with higher IN/INSBB (~10.6, range 7.3–11.6, n = 5) and lower INSH/NB (~0.65, range 0.57–0.97, n = 5) than P. circumsyrticus sp. nov. (IN/INSBB <6, INSH/NB usually >0.97); having lower RB/RH (<1) than these congeners (usually >1, except for some P. adamanteus sp. nov. individuals); having lower MBSR (~148, range 147–149, n = 5) than P. garrulus and P. kenkenses sp. nov. (≥158); IOS/MBSR (~0.26, range 0.24–0.29) usually higher than P. garrulus (~0.23, range 0.20–0.25, n = 10); having 3 internasal scales in contact with the rostral (vs. usually <3 for P. garrulus and P. adamanteus sp. nov., ≤2 for P. kenkenses sp. nov. and P. maculatus, and only 1 in P. circumsyrticus sp. nov.).
(Fig.
In life, the paratype PEM R23121 (Fig.
Life colour variation in Ptenopus australis sp. nov.: A, B PEM R23121 from farm Doringkraal, Western Cape Province, South Africa (–32.3355, 22.2053), photos by Alexander Rebelo; C iNaturalist record 58938339 from NE of Beaufort West, Western Cape Province, South Africa (–32.2087, 22.7614), photo by Courtney Hundermark.
In preservative (Fig.
See Table S1 for paratype and additional material measurements and scale counts, which does not vary substantially among the types. Colour pattern varies relatively little among specimens, with darker or lighter, finer or courser colour patterns being visible. Males have bright yellow gular patches, and may have slight yellow infusions on the legs and face (Fig.
The advertisement call (Figs
During peak chorus activity, this species appears to call much more frequently than most other species (although sample size is small), the call period being a very short 9 seconds. The typical period of calling activity in a day is not known, but the analysed calls (during full chorus) were recorded 20–40 minutes after sunset.
This species occurs on open Karoo scrub plains with sandy or gravelly substrate (
Very little is known about the natural history of this species, although it is assumed to be similar in many aspects to congeners, particularly to the sister species, P. garrulus, which also occurs in a similar climatic setting. So far, calls have only been recorded during late October, during the austral spring (recordings in this manuscript;
Diamond coast barking gecko
Afrikaans: Diamantkus blafgeitjie
Ptenopus garrulus maculatus
(in part) –
Ptenopus garrulus
(in part) –
All coastal and near-coastal specimens in the southern Namib Desert (Namibia) and Richtersveld (South Africa) previously referred to as ‘P. g. maculatus’, are presently assignable to this species. It appears to not occur sympatrically with any other species, except potentially with P. kenkenses sp. nov. on the eastern margins of its range. Northern and southern populations of this species display several notable differences, including body-size. However, phylogenetic evidence presently suggests that these populations may form a gradual cline, rather than being two distinct species.
NMNW R11390, adult male, collected from Grosse Bucht, south of Lüderitz, ||Karas Region, Namibia (–26.73379, 15.10412, 29 m a.s.l.), by Francois S. Becker and Bertha Buiswalelo on 27 September 2022.
NMNW R11391–3 (two adult males and one adult female NMNW R11391 = allotype), same collection details as the holotype; NMNW R11350, subadult female, collected from the pump house along main road, Sperrgebiet, ||Karas Region, Namibia (-26.9932, 15.3584), by Dayne Braine on 10 September 2021.
See Table S1 for unvouchered photographed specimens (21), DNA samples (17 available, 7 sequenced), and call recordings (8) included (total n = 28 excluding types).
This species is named in reference to the diamond-scattered coastline that forms its habitat, including the Sperrgebiet in Namibia and the Richtersveld in South Africa, where extensive diamond mining occurred historically and continues to this day. We use the specific epithet “adamanteus”, the Latin adjective meaning “of diamond”, framed in the male genitive to match the gender of Ptenopus.
Southern populations of this member of the genus have a small body size (SVL max. 45.1 mm, mean 39.4 mm, n = 19) with long tails (TL 77%, range 60–99%, n = 19) while that of the northern populations is moderate (up to 50.8 mm, mean 49.7 mm, n = 6), with a moderately long tail (TL 71%, range 67–76%, of SVL) and an overall lean appearance. It is distinguished from P. kochi, P. carpi, and P. sceletus sp. nov. by: Toes being intermediately fringed laterally (vs. weakly fringed in P. carpi and P. sceletus sp. nov. and extensively fringed in P. kochi), with fringe length being at least half the breadth of the toe between fringes (vs. generally less than half in P. carpi and P. sceletus sp. nov., generally equal to in P. kochi); having MBSR 141–185 (vs. ≤131 in P. carpi and P. sceletus sp. nov. and >185 in P. kochi); by having on the dorsum 4–5 paired, more-or-less symmetrical, light-coloured, ovoid markings on the body, about half the diameter of the eye or larger, interspaced by dark brown blotches (vs. more finely patterned dots in P. kochi and banded pattern in P. carpi and P. sceletus sp. nov.). It is further distinct from P. carpi and P. sceletus sp. nov. by the nasals being more swollen and the nostrils partially covered by internal projections of the upper labials; from P. kochi by having fingers laterally fringed with pointed triangular scales (vs. elongated pointed scales in P. kochi), and having white pigmented ventral scales on entire ventral surface (vs. pink, unpigmented patches on the tail and limbs in P. kochi).
From congeners previously included in ‘P. garrulus’ it is distinguished by: Having immaculate white pigmented scales on soles, vs. some pink, unpigmented scales on soles of P. garrulus and P. australis sp. nov., and dark speckling on the soles of P. kenkenses sp. nov. and P. australis sp. nov.; having a usually smaller internasal scale than P. circumsyrticus sp. nov., with IN/INSBB ~8 (usually >6.0, vs. usually <6.0 in P. circumsyrticus sp. nov.); higher RB/RH (~1.1, usually ≥1 and <1.2) than P. australis sp. nov. (usually ≤1.0), but lower than P. circumsyrticus sp. nov. (usually >1.1); usually lower INSH/NB (usually <1.1) than P. circumsyrticus sp. nov. (usually >1.1); having a generally higher IOS (mean 45, range 35–53, n = 30) and IOS/MBSR (mean 0.29, usually >0.24) than P. maculatus (IOS usually <37, IOS/MBSR usually <0.24); having one or two inernasal scales in contact with the rostral vs. three in P. australis sp. nov.
(Fig.
In life, the holotype (Fig.
Life colour variation and substrate matching in Ptenopus adamanteus sp. nov. (A–D: northern populations; E–H: southern populations): A NMNW R11390 (holotype), from Grosse Bucht, ||Karas Region, Namibia (–26.7338, 15.1041); B, C NMNW R11393 (paratype) from near locality A (–26.7208, 15.1026); D NMNW R11391 (allotype), from locality A; E NMNW R11610 from 30 km E of Port Nolloth, Northern Cape Province, South Africa (–29.3049, 17.1836), not on native substrate; F NMNW R11611 from the same locality as E on native substrate; G NMNW R11598 from Oranjemund, ||Karas Region, Namibia (–28.5541, 16.4982); H unvouchered specimen from Port Nolloth (–29.2403, 16.8631), only 30 km W of locality of E/F. Photos by Francois S. Becker.
In preservative (Fig.
Refer to Table S1 and Figure
The advertisement call (Figs
In coastal populations this species does not call often (longer call periods and fewer evenings of calling), but inland populations are more vocal. This is probably due to higher incidence of cold, foggy, windy weather closer to the coast, in which calling activity is reduced. Call period (5–20 s, mean 14 s) is short compared to most other species during peak chorus activity. It mainly calls from about 30 minutes before sunset until nightfall, with occasional calling later at night. This species may call sporadically throughout the day, particularly under foggy or cloudy conditions.
(Fig.
While its breeding phenology is not well known, our sampling suggests that calling/breeding peak activity occurs from September to November, like several other species. This species often wanders on the surface throughout the night, far from its burrow, and may be active despite cold, foggy weather, similar to P. carpi and P. sceletus sp. nov. The burrows are relatively complex with multiple side-tunnels, and a few egg clutches, usually two eggs but occasionally one, have been found inside burrows occupied by a female. This species occasionally closes the burrow entrance from the inside before daybreak, but may also be active diurnally, especially after or during foggy weather. Hatchlings have been observed digging their own burrows a day after hatching, and it is therefore expected that they do not remain in the parent burrows for any length of time. Males and females have not been observed sharing a burrow. This species has been observed feeding on spiders and termites, and it likely eats various arthropods.
Interdune barking gecko
Afrikaans: Duinstraat blafgeitjie
Ptenopus garrulus
(in part) –
Ptenopus garrulus maculatus
(in part) –
Specimens of P. circumsyrticus sp. nov. were not included in the earliest mentions of the name P. g. maculatus (e.g.,
NMNW R11394, adult male, collected from the interdunes plains south of the Kuiseb River from Gobabeb Research Station, ||Karas Region, Namibia (–23.57053, 15.03618, 415 m a.s.l.), by Francois S. Becker on 6 September 2022.
NMNW R11395 (allotype, adult female), R11396 and R11622 (adult males), with the same collection details as the holotype; R11346 (adult male) and R11371 (adult female), collected near the type locality (–23.5697, 15.0388), by Francois S. Becker on 17 September 2021.
See Table S1 for vouchered (3) and unvouchered photographed specimens (13), DNA samples (16 available, 11 sequenced), and call recordings (11) included (total n = 25 excluding types).
This species is named in reference to its habitat: It occurs in and around the sand sea, on interdune plains or dune streets, and on sandy plains at the edge of the sand sea. They do not occur on the dunes themselves. Thus, we use the specific epithet “circumsyrticus”, the Latin adjective meaning “around the dune”, framed in the male genitive to match the gender of Ptenopus.
A moderately small Ptenopus (SVL max. 54.9 mm, mean 48.6 mm, n = 16) with a short tail (TL 62% [range 48–73] of SVL, n = 8) and a lean appearance. It is distinguished from P. kochi, P. carpi, and P. sceletus sp. nov. by being substantially smaller; toes being intermediately fringed laterally (vs. weakly fringed in P. carpi and P. sceletus sp. nov. and extensively fringed in P. kochi), with fringe length being at least half the breadth of the toe between fringes (vs. generally less than half in P. carpi and P. sceletus sp. nov., generally equal to in P. kochi), although fringing can be more extensive in specimens found in looser sand, such as close to Walvis Bay or Far East Dunes; by dorsal colour pattern, characterised by paired, large, subsymmetrical, light ovoid markings interspaced by dark blotches (vs. spotted pattern in P. kochi and banded pattern in P. carpi and P. sceletus sp. nov.). It is further distinct from P. carpi and P. sceletus sp. nov. by the nasals being more swollen and the nostrils partially covered by internal projections of the upper labials; from P. kochi by having fingers laterally fringed with pointed triangular scales (vs. elongated pointed scales in P. kochi), having white pigmented scales on entire ventral surface (vs. pink, unpigmented patches on the tail and limbs in P. kochi), and having MBSR 108–179 (vs. >180 in P. kochi), with finer lepidosis presenting in specimens found in looser sand.
From congeners previously included in ‘P. garrulus’ it is distinguished by: The internasal scale usually being larger and broader than other species, with IN/INSBB being generally lower (median 4.5, range 3.6–5.8, but usually <4.7) than other species (usually >5.0); having higher RB/RH (median 1.27, usually >1.17) than P. adamanteus sp. nov., P. australis sp. nov., and P. garrulus (usually <1.17); having higher INS/NB (~1.61, usually >1.10) than P. adamanteus sp. nov., P. australis sp. nov., and P. garrulus (usually <1.20); having lower MBSR (median 144, usually <160) than P. kenkenses sp. nov. and P. garrulus (usually >160); higher IOS/MBSR (median 0.31, usually >0.25) than P. maculatus and P. garrulus (usually ≤0.25); having only one inernasal scale in contact with the rostral, while P. australis sp. nov. has three; having no pink, inpigmented scales on the soles (vs. some unpigmented scales in P. garrulus and P. australis sp. nov.).
(Fig.
In life, the holotype (Fig.
Life colour variation in Ptenopus circumsyrticus sp. nov.: A NMNW R11394 (holotype) from Gobabeb, Erongo Region, Namibia (–23.5732, 15.0368); B FB2003 (unvouchered) from Keerwerder, NamibRand, Hardap Region, Namibia (–24.9818, 15.9338); C, D FB2080 from NE of Gobabeb (–23.3175, 15.5700); E unvouchered specimen from near locality of C; F NMNW R11355 (paratype) from near locality of B (–24.9495, 16.0397). Photos by Francois S. Becker.
In preservative (Fig.
Refer to Table S1 and Figure
The advertisement call (Figs
The call strongly resembles the sound of bouncing marbles and on a warm evening on the interdunes thousands can be heard calling in chorus. Call period (mean 133 s) varies greatly, but can be as brief as 16 seconds during peak chorus activity. This species tends to occur (and call) at higher densities than the sympatric congeners P. maculatus and P. kochi. It calls from shortly before sunset and calling activity may continue throughout the night as long as the moon is above the horizon, particularly on warm evenings. This species occasionally calls during the day, especially during foggy or cloudy conditions, but generally not during rainy conditions.
This species occurs on sandy soils including interdune plains within, and sandy plains around the northern and eastern edges of the Namib erg, Namibia (Fig.
It has not been found in sympatry with P. kenkenses sp. nov., but overlap is likely in the southern portion of its range. It occurs parapatrically alongside P. kochi, P. maculatus, and possibly P. carpi sensu stricto (near the northern border of the Kuiseb River), as these species occupy different substrates in close geographic proximity. Occasionally, it has been found in sympatry and even syntopy with P. maculatus on the sandier patches of the gravel plains north of the Kuiseb River, and with P. kochi in the Namib erg, near the edges of the interdunes where the two species’ preferred substrates overlap. On broad interdunes, P. circumsyrticus sp. nov. occurs in allopatry.
The peak calling and breeding season is in the austral spring to summer (August to November), although some calling may take place outside this period. Two eggs (dried out) have been recovered from an abandoned burrow, so clutch size can be up to two. The burrows are generally less complex than the parapatric P. kochi and P. maculatus, and appear to be inhabited solitarily. Very small juveniles have been observed in burrows of their own. While multiple natural predators for Ptenopus spp. have been observed and hypothesised (
Common names.
Nama barking gecko
Nama: ||en||ense / ||en||enses (“||” = lateral click)
Afrikaans: Nama blafgeitjie
Ptenopus garrulus maculatus
(in part) –
Ptenopus garrulus
(in part) –
All Ptenopus specimens that occur on compact substrates in the northern Nama Karoo, i.e., inland in the south of Namibia and from the Northern Cape (Great Karoo), are likely to be assignable to this species.
NMNW R11389, adult male, collected from farm Goris near Giants’ Playground, ||Karas Region, Namibia (–26.4538, 18.3097, 1106 m a.s.l.), by Francois S. Becker and Bertha Buiswalelo on 27 September 2022.
NMNW R10839 (adult female, allotype) and NMNW R10841 (adult male) collected from Koës, ||Karas Region, Namibia (-25.9364, 19.0869, 1000 m a.s.l.), by Francois S. Becker, Hileni Shivolo and Sisamu Baepi on 6 October 2020; NMNW R11388, adult male, with the same collection details as the holotype.
See Table S1 for unvouchered photographed specimens (13), DNA samples (11 available, 7 sequenced), and call recordings (9) included (total n = 20 excluding types).
This species is named after the Nama name for the gecko, “||en||enses”, pronounced with two lateral clicks (produced by clicking with one’s tongue on the posterior-lateral roof of one’s mouth, similar to the typical command given for a horse to speed up), in reference to the clicking sound that it makes. The name is usually formed in the Nama female genitive, indicated by the suffix “s”, because the animal is small. This gecko occurs throughout the Nama Karoo and various places that were historically, and are currently, occupied by the Nama people. The Nama are highly familiar with its call, and believe the bite of this gecko to be extremely venomous. Nama children are taught to treat it with caution. However, the authors have been bitten by this species, and have survived.
We use the specific epithet “kenkenses”, a noun in apposition. Since the Nama symbols cannot be included in a scientific name, the phonetically similar letter “k” is used instead. However, the use of Nama lateral clicks is recommended in the pronunciation of this name.
A medium-sized Ptenopus (SVL max. 58 mm, mean 51.3 mm, n = 10) with a short tail (TL 65% [range 60–72] of SVL, n = 7) and a stout appearance. It is distinguished from P. kochi, P. carpi, and P. sceletus sp. nov. by the following characters: Toes being intermediately fringed laterally (vs. weakly fringed in P. carpi and P. sceletus sp. nov. and extensively fringed in P. kochi); having MBSR ~162, range 158–169 (vs. >180 in P. kochi and <135 in P. carpi and P. sceletus sp. nov.); by dorsal colour pattern being characterised by large, paired, light, subsymmetrical ovoid markings interspaced with or dominated by dense, dark brown mottled patches (vs. more finely spotted pattern in P. kochi and banded pattern in P. carpi and P. sceletus sp. nov.). It is further distinct from P. carpi and P. sceletus sp. nov. by the nasals being more swollen and the nostrils partially covered by internal projections of the upper labials; from P. kochi by having fingers laterally fringed with pointed triangular scales (vs. elongated pointed scales in P. kochi) and having entire ventrum covered in white/cream ventral scales with some dark brown/grey specking (vs. pink, unpigmented patches on the limbs and tail of P. kochi).
From congeners previously included in ‘P. garrulus’ it is distinguished by: Having a generally smaller internasal scale with higher IN/INSBB (median 7.4, range 5.6–11.0, n = 12), than P. circumsyrticus sp. nov. (usually <5.6); having a broader rostral with higher RB/RH (median 1.21, range 0.98–1.42, n = 12) than P. australis sp. nov. (<0.98); having generally higher MBSR (≥147) than P. australis sp. nov., P. circumsyrticus sp. nov., and P. maculatus (usually <147 except some P. circumsyrticus sp. nov.); having 2 or fewer internasal scales in contact with the rostral, while P. australis sp. nov. has three; colour pattern distinct from P. garrulus in having 4–5 large and distinctive paired, light, ovoid markings interspaced by distinct dark mottled patches usually touching the light markings (vs. more rows of and smaller white spots and overall more speckled pattern in P. garrulus), and ovoid patterning on ventro-lateral portions of the face being more distinctive (vs. indistinct or absent in P. garrulus).
(Fig.
In life, the holotype and similar paratype NMNW R11388 (Fig.
Life colour variation and substrate matching in Ptenopus kenkenses sp. nov.: A, C NMNW R11388 (paratype) from Giant’s Playground, ||Karas Region, Namibia (–26.4538, 18.3097); B NMNW R11655 from S of Aus, ||Karas Region, Namibia (–26.7073, 16.2829); D NMNW R11648 from locality B; E FB454 from W of Aus (–26.5700, 15.8389); F FB456 from W of Aus (–26.6478, 16.2147). Photos by Francois S. Becker.
In preservative (Fig.
Refer to Table S1 and Figure
The advertisement call (Figs
Calling activity for this species commences ~ 30 min before sunset and may continue late into the night if the moon is up. Call period (mean 84 s) varies considerably, but can be as low as 18 seconds during peak chorus activity. Peak calling activity occurs from September to November.
This species occurs on consolidated soils such as gravel, alluvial silt, or compacted sandy soils throughout the northern Nama Karoo: southern Namibia and probably the Northern Cape, South Africa (Fig.
It has not been recorded in sympatry with any other species but occurs parapatrically to P. garrulus near Koës, Namibia (with P. garrulus occurring in the Kalahari Sand Sea), and in the Northern Cape, South Africa (where patches of Kalahari sand occur on more consolidated soils). It has been recorded ~40 km from the nearest confirmed P. adamanteus sp. nov. record in the west, and no closer than ~60 km from the nearest confirmed P. circumsyrticus sp. nov. record in the northwest of its range.
Calling (and therefore breeding) activity appears to be seasonal, probably peaking in the austral spring and early summer. This species is seldom found on the surface, except early in the evening during peak chorus activity. Burrow entrances are nearly always sealed after calling ceases, or during the day; the entrance is sealed from the inside, and it is so neatly disguised as to be almost entirely indistinguishable from the surrounding soil surface. The burrow is then re-opened before calling commences. It has been observed consuming large numbers of harvester termites (Hodotermes mossambicus), even up to 61% of its own body-weight, during sporadic events when these termites emerge en masse to forage (
Aggregations of this species are sometimes observed on tarred roads late at night, numbering in the hundreds on a few kilometres of road. The reason for this behaviour is unknown.
Carp’s barking gecko
Afrikaans: Carp se blafgeitjie
Ptenopus carpi Brain, 1962: plates 1b, c, e, fig. Ib,
The type locality of P. carpi is “gravel plain approximately 1 mile north of the Kuisib R. [Kuiseb River] at Gobabeb, Central Namib Desert [Erongo Region], S.W.A. [Namibia]” (-23.5456, 15.0400). Currently, no P. carpi can be found at this location. The closest location of current occurrence from Gobabeb, is 9 km to the northwest. Charles Brain’s son, Conrad Brain, who had attended the field trip, claims that they were a little lost that evening and likely the real type locality was more to the northwest, where the species currently occurs (Brain pers. comm. 2023).
Here, we split “P. carpi” into two species. The topotypical population south of the Swakop River is assigned the name P. carpi sensu stricto, while P. sceletus sp. nov. is described from north of the Swakop River, below. We hereby restrict the range of P. carpi sensu stricto to between the Kuiseb and Swakop rivers. In light of this revision, the advertisement call of P. carpi sensu stricto has not been recorded or described before;
Ptenopus carpi sensu stricto is the only member of this genus that lacks sexual dichromatism, with both sexes displaying a yellow gular patch (Fig.
TM 25973, adult male, collected “on gravel plain approximately 1 mile north of the Kuisib R. [Kuiseb River] at Gobabeb, Central Namib Desert [in the Erongo Region], S.W.A. [Namibia]” (probably –23.5456, 15.0400), by Charles K. Brain in May 1959.
TM 25966–70, 25972, 25974–25979, 25981–86, 25990–93, 25995, 25997–8, 26207 (10 adults, 10 subadults and 6 juveniles), all from the same locality as the holotype.
See Table S1 for unvouchered photographed specimens (49), DNA samples (32 available, 9 sequenced), and call recordings (3) included (n = 51).
A large Ptenopus (SVL max. 64.7 mm, mean 53.7 mm, n = 33) with a moderate tail (TL 66.7% [range 61–72] of SVL) and lean appearance, with slender limbs and reduced toe fringes compared to other species. Preserved specimens are morphologically indistinguishable from P. sceletus sp. nov., but usually have a longer snout or narrower head (than P. sceletus sp. nov.), clearly visible from below (compare Figs
Life colour variation in Ptenopus carpi: A NMNW R11822 from Walvis Bay Airport, Erongo Region, Nambia (–23.0003, 14.6695); B NMNW R11809 from NW of Gobabeb, Erongo Region, Namibia (–23.4530, 14.9637); C NMNW R11815 from locality A; D NMNW R11798 from locality A, NMNW R11810, and NMNW R11808 from NW of Gobabeb (–23.4533, 14.9642), showing iris colouration variation from deep red to light ochre; E NMNW R11808 (male) and NMNW R11819 (female) from NW of Gobabeb (–23.4235, 14.9353), showing clear gular patches on both sexes (patch size and shape varies in both sexes, but tends to be more extensive in males). Photos by Francois S. Becker.
The advertisement call (Figs
The call seems to vary more than other species, with calls sometimes having as few as one to three notes, especially late at night. Call period (mean 349 s) varies greatly, but is usually much lower than other species, and has not been recorded any faster than 2 min during peak chorus activity. This species does not chorus as notably as other species.
Calling activity is crepuscular to nocturnal, calls starting well after sunset and often continuing throughout the night to some degree. One instance of a notable chorus was recorded near Walvis Bay airport on 19 April 2018. Chorusing started abruptly at ~25 min after sunset, and lasted for about 20 minutes, with very reduced calling activity continuing later into the night. Calling appears to be somewhat seasonal with a peak around April to August, coinciding with lower fog incidence. Calling activity is more pronounced on warmer evenings but may continue despite cold, foggy conditions.
As with other species, P. carpi calls from the burrow entrance, although it may also call (advertisement call) occasionally while roaming. This could not be observed directly, but a wandering gecko was often spotted in the area where a call was just heard. Having said that, wandering geckos are easier to spot than geckos in a burrow.
Ptenopus carpi occurs on hard gravel plains in the central Namib Desert, Namibia, from the northern banks of the Kuiseb River to the southern banks of the Swakop River, central Namib Desert (Fig.
In light of this revision, P. carpi has a restricted range, estimated at ~1400 km2. While most of its range is presently encapsulated by statutory protected areas (Namib-Naukluft National Park and Dorob Park), on the ground management of the habitat in these areas is poor. In particular, mining and industrial activities and the degradation of the gravel plains by motorists occurs within this the protected areas. The result is that more than 80% of the species range is currently within zones encompassing active mining licenses, exclusive prospecting licenses, and reconnaissance licenses (
The breeding season for P. carpi appears to be between April (earliest recorded calls) and August, with some juveniles having been found between November and February.
Ptenopus carpi does not call nearly as often as congeners (similar to P. sceletus sp. nov.) but appears to spend more time wandering on the surface, even far from its burrow. It is active much later into the night than congeners, often only emerging well after dark, and its activity is not dampened by cold or foggy conditions (as in most other species, except P. sceletus sp. nov. and, occasionally, P. adamanteus sp. nov.).
The burrow is usually shallower and simpler than those of other species but may have two to three side-branches and typically has an escape exit (as in other species). Gravid females observed (FB) generally contain two eggs, which are presumably laid in the burrow, as in other species.
Ptenopus carpi utters two different calls: The advertisement call and the single-pulse call, also previously noticed for the closely related P. sceletus sp. nov. (
Skeleton Coast barking gecko
Afrikaans: Skedelkus blafgeitjie
Ptenopus carpi
–
Ptenopus carpi
(in part) –
Ptenopus sceletus sp. nov. is closely related to P. carpi but occurs predominantly north of the Swakop River, while P. carpi only occurs to the south. A single call from one individual in captivity was previously described by
NMNW R12100, adult male, collected from NE of Swakopmund (Skeleton Coast), Erongo Region, Namibia (–22.6259, 14.5457), by Francois S. Becker on 21 April 2023.
NMNW R12101–3, adult males except for NMNW R12101 (adult female, allotype), same collection details as the holotype.
See Table S1 for vouchered (2) and unvouchered photographed (50) specimens, DNA samples (34 available, 8 sequenced), and call recordings (7) included (total n = 62 excluding types).
This species is named in reference to the Skeleton Coast, which generally refers to the coastal Namib Desert between the Swakop River and the Kunene River, encapsulating the species’ entire distribution and type locality. In addition, the white or grey dorsal surfaces of the head and feet give the gecko a ghostly or skeletal appearance (Fig.
A moderately large Ptenopus (SVL max. 57.1 mm, mean 52.7 mm, n = 18) with a moderate tail (TL 70% [range 62–80] of SVL, n = 12), an overall lean appearance, and comparatively slender limbs. In preserve state it is morphologically indistinguishable from P. carpi except by having a generally broader or shorter head/snout, when viewed from beneath (Fig.
(Fig.
In life, the holotype (very similar to paratype NMNW R12103; Fig.
Life colour variation in Ptenopus sceletus sp. nov.: A NMNW R12103 (paratype) from N of Swakopmund, Erongo Region, Namibia (–22.6259, 14.5457); B NMNW R12101 (allotype) from locality A; C NMNW R11763 from Hoanib River, Kunene Region, Nambia (–19.3539, 13.1453); D NMNW R11754 from Henties Bay, Erongo Region, Namibia (–22.1584, 14.3086); E NMNW R12100 (holotype) and NMNW R011771 from the same locality as A, showing sexual dichromatism in gular patches of this species (male gular patch may be divided or undivided, while female only has slight shades of yellow on lateral edges); F NMNW R11771 from N of Swakop River near Swakopmund (–22.6652, 14.57619) and NMNW R11755 from N of the Omaruru River near Henties Bay (–21.7703, 14.5520), showing iris colour variation from silver (most common in the sourthern extreme of the range) to brown (more common further north). Photos by Francois S. Becker.
In preservative (Fig.
Refer to Table S1 for range of morphometric characters, including the paratypes. Morphometric characters vary relatively little among specimens, although the colours vary somewhat (Fig.
The advertisement call (Figs
Sonograms (top graphs) and oscillograms (bottom graphs) of representative advertisement calls of Ptenopus species (A–J, species names indicated on graphs). Both x and y axes are directly comparable / equally scaled across species. Specimen numbers and localities: A NMNW R11585, NE of Koës, Hardap Region, Namibia; B iNaturalist 140169978 (Jacobus Retief), Merweville, Western Cape Province, South Africa; C NMNW R11622, E of Lüderitz, ||Karas Region, Namibia; D NMNW R11643, SW of Gobabeb, Erongo Region, Namibia; E NMNW R11657, NE of Keetmanshoop, ||Karas Region, Namibia; F NMNW R11704, Gobabeb; G NMNW R11716, Hoanib River, Kunene Region, Namibia; H NMNW R12114, Gobabeb; I NMNW R11843, NW of Gobabeb; J NMNW R11790, N of Swakopmund, Erongo Region, Namibia. The audio files on which this figure is based, are made available (File S2).
The call appears to vary more than the calls of other species, except for P. carpi, with calls uttered late at night sometimes having only one to three notes. Call period (mean 365 s) varies greatly, but is usually lower than other species, and has not been recorded any shorter than 104 s during peak chorus activity. This species does not chorus as notably as most other species. Calls can be heard from after sunset to late at night. Seasonal phenology of calling activity is not known, but calls have been recorded in May and October. Calling activity is more pronounced on warmer evenings, but may continue despite cold, foggy conditions.
As with other species, P. sceletus sp. nov. calls from the burrow entrance, although it may also call occasionally while roaming. This could not be observed directly, but a wandering gecko was often spotted in the area where a call was just heard–although wandering geckos are easier to detect than geckos in a burrow.
This species occurs from the southern banks of the Swakop River, northwards in a narrow strip along the Skeleton Coast (northern Namib Desert), to the southern tip of the northern Namib erg, near the Kunene River (Namibia-Angola border; Fig.
This species occurs parapatrically with P. carpi across the Swakop River and sympatrically in the Rössmund area, just south of the river. Ptenopus sceletus sp. nov. occurs in sympatry or parapatry with P. maculatus in the eastern portions of its range (P. maculatus occurs only on silts in the northern limits of its range, while P. sceletus sp. nov. remains on gravels in that area).
The peak calling and breeding season of Ptenopus sceletus sp. nov. is probably between May and October (span of current call recordings), and juveniles have been found in November. This is slightly later than the apparent breeding season for P. carpi, but also coincides with months of somewhat lower fog incidence.
This species does not call nearly as often as most congeners, but appears to spend more time wandering on the surface, even far from the burrows (as in P. carpi and P. adamanteus sp. nov.). It is active much later into the night than most congeners, often only emerging well after dark, and its activity is not dampened by cold or foggy conditions (as in most other species).
The burrow is usually shallower and simpler than those of other species, but may have two to three side-branches and typically has an escape exit (as in other species). As in P. carpi, it utters two different calls: The advertisement call and the single-pulse call, the latter usually uttered late at night after the main calling activity has ceased, and especially during dense fog.
(see Fig.
| 1 | Toes weakly fringed; nasals not swollen, nostrils open; banded dorsal colour pattern | 2 |
| – | Toes strongly fringed laterally; nasals more or less swollen; nostril partly closed by internal projection of upper nasal | 3 |
| 2 | (Life): Iris red or ochre; bright yellow gular patch in both sexes, relatively narrow head | P. carpi |
| – | (Life): Iris silver or brown; yellow gular patch absent in females, relatively broad head | P. sceletus sp. nov. |
| 3 | Fingers flattened, fringed with elongated pointed scales; body scales minute (midbody scale rows 187-222); ventrum white with pink / unpigmented patches on the tail and limbs | P. kochi |
| – | Fingers not depressed, edged with pointed triangular scales; body scales usually larger (midbody scale rows 110–202) | 4 |
| 4 | Extensive fringing on the toes, fringe length roughly equal to breadth of ventral scale attached to fringe; occurs on more-or-less sandy soils | 5 |
| – | Intermediate fringing on the toes, fringe length usually less than breadth of ventral scale attached to fringe; occurs on consolidated soils | 8 |
| 5 | Broad rostral (rostral breadth/rostral height usually >1.2); only one large internasal (internasal scale height/nasal breadth usually ≥1.3); midbody scale rows usually <160 and interorbital scales/midbody scale rows usually >0.27 | P. circumsyrticus sp. nov. |
| – | Narrower rostral (rostral breadth/rostral height usually <1.2); 1–3 internasals, with internasal scale height/nasal breadth usually <1.4; midbody scale rows usually >140 and interorbital scales/midbody scale rows usually <0.3 | 6 |
| 6 | Midbody scale rows usually >170; interorbital scales/midbody scale rows usually <0.25; usually 1–2 internasal scales with internasal scale height/nasal breadth usually >1.0 | P. garrulus |
| – | Midbody scale rows usually <170; interorbital scales/midbody scale rows usually >0.25; internasal scale height/nasal breadth usually <1.0 | 7 |
| 7 | Only 1–2 internasal scales in contact with rostral; midbody scale rows usually >155; rostral breadth/rostral height usually >0.95; interorbital scales usually >40 | P. adamanteus sp. nov. |
| – | Has 3 internasal scales in contact with rostral; midbody scale rows usually <155; rostral breadth/rostral height usually <0.95; interorbital scales usually <43 | P. australis sp. nov. |
| 8 | Midbody scale rows usually <150; interorbital scales usually <36; ventrum and soles immaculate white | P. maculatus |
| – | Midbody scale rows >160, interorbital scales usually >36; palms/soles usually speckled or mottled with grey | P. kenkenses sp. nov. |
| 1 | Full call has >7 notes | 2 |
| – | Full call has 7 or fewer notes | 4 |
| 2 | Note rate >5 s-1, inter-note interval range <55% (intervals regular), median call density >0.19, notes >9 | P. kochi |
| – | Note rate <5 s-1, inter-note-interval range usually >55%, median call density <0.12 | 3 |
| 3 | Upper dominant frequency <3.8 kHz, inter-note intervals long (median ≥500 ms) and decreasing (shorter) towards the middle of the call (note repetition gets faster), then sometimes increasing again | P. carpi |
| – | Upper dominant frequency >3.8 kHz, inter-note intervals usually <500 ms and increasing towards the end of the call (note repetition slows down) or sometimes remaining consistent | P. sceletus sp. nov. |
| 4 | Note 1 deviance >100%, median call density >0.17 | P. maculatus |
| – | Note 1 deviance <50 | 5 |
| 5 | Note repetition rate >3.7 s-1 | P. garrulus / P. australis sp. nov. |
| – | Note repetition rate <3.7 s-1 | 6 |
| 6 | Median call density >0.18, note duration >60 ms, first note usually notably longer | P. kenkenses sp. nov. |
| – | Note duration regular, call density <0.18 | 7 |
| 7 | Last inter-note interval notably longer than others, inter-note interval range >30% | P. adamanteus sp. nov. |
| – | Inter-note intervals regular, range <30% | P. circumsyrticus sp. nov. |
Note: This key is most effective when applied to calls recorded during peak chorus time; this key is best used in combination with geographic location, as calls are usually more different where species occur adjacent or in sympatry. See Table
Number of notes in P. carpi can be lower than indicated in the key, sometimes uttering a single note (this type of call appears to have a different function than the advertisement call). In P. maculatus populations in the Hoanib River, north-western Namibia, the note 1 duration deviance is unusually low (~30%).
An updated taxonomic treatment for Ptenopus shows there are at least nine species in the genus. Five are newly described, while one subspecies was raised to full species. These species are all supported by at least three lines of evidence under the GLC (
There are several instances where two or three species (including newly described species) are sympatric or syntopic with no indication of clinal changes from one species to the next. This shows that they behave as different species when in close proximity, with no evidence yet of interbreeding. One possible exception is a phenotypically intermediate individual between P. carpi and P. sceletus sp. nov., which was observed in the sympatric zone between these species. Even if this individual is a hybrid, one individual out of 52 observed at the contact zone is probably a rare event. The genetic divergence between P. carpi and P. sceletus sp. nov. is low, but entirely discontinuous: There is no genetic cline evident at the contact zone, including within the sympatric zone. More importantly, clear mechanisms for mate recognition have already emerged: Different advertisement calls, dramatically different iris colouration, and different sexual dichromatism seen nowhere else in the genus. This indicates that the two species are already in the third stage of the speciation process (
There is also moderately low genetic divergence between the sister species P. australis sp. nov. and P. garrulus, indicating another relatively young speciation event (Tables
Despite the two recent speciation events formalised in this paper, we do not recommend further splitting Ptenopus or other gecko species based on comparatively low phylogenetic divergence alone. In this paper, several substantially deeper genetic divergences were not considered species-level, due to a lack of rigorous evidence that genetic divergence is discontinuous, and in the absence of several additional operational criteria being satisfied. Rather, rigorous sampling in the geographic contact zones between hypothesised species is needed, and an integrated approach must be used to draw any further taxonomic conclusions.
There is strong evidence of a mate recognition system in Ptenopus based on call divergence, similar to that recorded for other vocal groups such as anurans (
Calls are a reliable species-identification character in Ptenopus. In keeping with the tradition of previous descriptions and taxonomic revisions of Ptenopus, this revision includes a major descriptive component of the advertisement calls and, for the first time, a key. A quick reference guide or “cheat-sheet” to the call features per species (Table
Morphological characters were less reliable than calls for distinguishing Ptenopus species, indicating morphological conservatism in the genus. Although species P. kochi and P. carpi / P. sceletus sp. nov. are clearly distinct from the rest (
The updated distributions of Ptenopus species (Fig.
In the species descriptions, we summarise the knowledge on the ecology and life-history traits of all Ptenopus species, including new insights. There are several over-arching similarities throughout the genus, while other life-history traits appear to differ substantially. Termites are a major food source for most Ptenopus species, which do not need to forage more than a few metres from the safety of their burrows to feed on emerging termites. Ptenopus are usually patchily distributed, and higher abundances often correspond to higher abundances of termite nests or nest entrances. By exception, the coastal fog-band species (P. carpi, P. sceletus sp. nov. and P. adamanteus sp. nov.) tend to forage further and more frequently than other species, and, from observations, their diet consists of a wider range of arthropods other than termites. One to two eggs (clutch size varies among species) are laid inside the burrow in all species, and mating appears to take place, invariably, within the burrow. Pre-mating rituals differ, but all species make use of both vocal (advertisement calls) and visual (gular patches) signals. The male provides the initial signals from his burrow entrance. In some species, the attracted female responds with soft vocal and/or visual signals, including scratching and head-bobbing, when approaching the calling male. Most species are solo occupants of their burrows, except for short periods of time post-copulation, after which females take over the male burrow. By contrast, P. kochi mating pairs and young share burrow systems for extended periods. Most species call and breed between spring and summer with differences in the length, variability, and starting time of the breeding season. The species P. carpi and P. sceletus sp. nov. appear to breed from winter to spring, contrary to the overall generic pattern. Ptenopus tend to be the most abundant lizard species in the arid areas where they occur. This relative success is likely owed to the security afforded by their burrow systems, which also have multiple side-branches and an escape exit. Ptenopus have excellent hearing compared to other lizards and are hyper-alert at their burrow entrances–a feature that makes capturing them extremely difficult, compared to co-occurring species. They are also shy, exceptionally well-camouflaged on the local substrate, and are able to efficiently attract mates from a distance and from the safety of their burrows. This genus has several interesting life-history traits which have the potential for many ecological and behavioural studies in the future.
This research was funded in part by the authors’ hosting institutions. Additional funding was provided by the Nedbank GoGreen Fund, the JRS Biodiversity Foundation, and the National Research Foundation of South Africa (Foundational Biodiveristy Information Program, Grant # UID 98864). FSB also received funding from the Allan Gray Orbis Foundation. Research was conducted under national and provincial permits in Namibia and South Africa: Northern Cape Province FAUNA 0124/2022; Eastern Cape (CRO35/15CR, CRO36/15CR, CRO67/16CR, CRO68/16CR, CRO185/16CR, CRO186/16CR; Namibian Commission on Research, Science and Technology permit AN20191118. Ethics clearance was granted by the University of the Witwatersrand AREC 2019/05/36/B.
We thank Aaron Bauer, Werner Conradie, and one anonymous reviewer for their thorough reviews that have improved this manuscript. We are grateful to Werner Conradie for his advice and guidance on the taxonomic treatments, for providing photographs and measurements, and for his collection of the type series of P. australis (although not intentionally for this purpose), along with Alex Rebelo and Philip Jordaan. We thank Marius Burger, Werner Conradie, Alex Rebelo, Nicolas Telford, Francois Theart, Dayne Braine, Heinrich le Roux, Courtney Hundermark, Ian Engelbrecht, and Jacobus Retief for kindly providing important samples, photos, and/or recordings. We thank Aaron Bauer and Marcellinus Swartbooi for advising on species names. We thank Patrick Campbell for providing photographs of the P. maculatus and P. garrulus types. We thank the SANBI Molecular Ecology team, especially Nikki Rodewald, Nicolas Telford, Jessica da Silva, and Keenan Meissenheimer, for their help and guidance during the labwork phase. We are grateful to Kalahari Bush Breaks and the Spitzkoppen Campsite (especially to Ronnie and Elsabé Barnard), Farm Bloukop and Viljoenskroon (Nico and Gina Olivier), Hoanib Skeleton Coast Camp of Wilderness Safaris (especially Emsie Verwey and Conrad Brain), Ongava Research Centre (especially Rolf Becker and Frowin Becker), and the Okaukuejo Research Camp in Etosha National Park, Ministry of Environment, Forestry and Tourism (especially Claudine Cloete and Werner Killian), for hosting FB during fieldwork and sampling, and to the many farmers, landowners, and control or chief control wardens that have allowed access onto the properties in their charge. We thank kykNET "Bewonder en Bewaar", especially Bonné de Bod and Susan Scott, for shedding a PR light on this work and on these wonderful creatures. Finally, we thank Eugene Marais for his extensive support and guidance during the early phases of the project, and Gillian Maggs-Kölling for her support during FSB’s time at Gobabeb.
Table S1
Data type: .xlsx
Explanation notes: Table of referred Ptenopus material including specimens, advertisement call recordings, DNA or tissue samples, and photos. GenBank accession numbers are indicated for all sequenced DNA samples for nuclear gene c-mos, or mitochondrial genes ND2 and 16S. Standard Darwin Core terms are used for metadata, while non-Darwin Core terms are capitalised. Morphological abbreviations: interorbital scales (IOS); number of midbody scale rows (MBSR); inter-nasal scales (INS); nostril (horizontal diameter) breadth (NB); internarial distance, from the nearest edges of the nares (IN); rostral (horizontal) breadth at the lower edge of the lip (RB); rostral (vertical) height (RH); horizontal breadth of the base of the largest inter-nasal scale in contact with the rostral (INSBB); vertical height of the largest inter-nasal scale (INSH); presence of a yellow gular patch and iris colouration is also indicated as described in the manuscript..
Figures S1, S2
Data type: .pdf
Explanation notes: Bar charts of sexual dichromatism and iris colouration in the two putative species of ‘Ptenopus carpi’.
File S1
Data type: .r
Explanation notes: R code for analysing batches of calls, cut into separate WAV files. Details of various functions, packages, and parameters to set, are included in the extensive comments. Please note the correct versions of the packages used in-text.
File S2
Data type: .zip
Explanation notes: Zipped folder of .wav files: representative audio recordings of advertisement calls of the various Ptenopus species, including the recordings on which Fig.